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Hox-A ENCODE Region - SNP Allele Frequencies
We are currently genotyping all Hox-A SNPs against three DNA panels using FP-TDI technology.
| SNPs within Hox-A Region (26665793 - 27165792 on 7p) | Position
(kb) | RS number | Class | Order | CEPH | Yoruba | Chinese | Japanese | | 26670 | rs3801807 | validated | H098 | Pass (0.220) | Pass (0.180) | Pass (0.090) | Pass (0.070) | | 26674 | rs3801803 | validated | H082 | Pass (0.200) | Pass (0.190) | Pass (0.120) | Pass (0.140) | | 26682 | rs213527 | two-hit | H172 | Pass (0.460) | In-progress | In-progress | In-progress | | 26689 | rs213529 | validated | H113 | Pass (0.210) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26694 | rs213532 | validated | H098 | Pass (0.380) | In-progress | In-progress | In-progress | | 26698 | rs7780386 | validated | U001 | Pass (0.430) | Pass (0.320) | Pass (0.430) | Pass (0.380) | | 26699 | rs2163705 | tsc-overlap | U001 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26700 | rs10251711 | non-validated | H172 | QC-failed | In-progress | In-progress | In-progress | | 26701 | rsERO3 | bcm-1 | H180 | Pass (0.000) | Pass (0.000) | Pass (0.020) | Pass (0.000) | | 26701 | rsERC3505 | bcm-1 | H178 | Pass (0.020) | Pass (0.000) | Pass (0.010) | Pass (0.000) | | 26701 | rsERY4 | bcm-2 | H182 | Pass (0.010) | QC-failed | Pass (0.000) | Pass (0.000) | | 26701 | rsERC3506 | bcm-1 | H180 | Pass (0.020) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26701 | rs4323383 | bac-overlap | U001 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26701 | rs11972133 | non-validated | H183 | QC-failed | QC-failed | QC-failed | QC-failed | | 26701 | rsERC3507 | bcm-1 | H183 | Pass (0.030) | QC-failed | QC-failed | QC-failed | | 26701 | rs13309156 | non-validated | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26702 | rsERC3508 | bcm-4 | H183 | Pass (0.020) | Pass (0.000) | QC-failed | QC-failed | | 26702 | rsERY5 | bcm-1 | H178 | Pass (0.000) | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26702 | rsERC3510 | bcm-1 | H180 | QC-failed | Pass (0.000) | QC-failed | QC-failed | | 26703 | rsERY7 | bcm-1 | H178 | Pass (0.000) | Pass (0.040) | Pass (0.000) | Pass (0.000) | | 26703 | rsERO5 | bcm-1 | H178 | Pass (0.000) | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26703 | rsERC3511 | bcm-1 | H180 | QC-failed | Pass (0.000) | QC-failed | QC-failed | | 26703 | rsERY8 | bcm-1 | H180 | QC-failed | QC-failed | QC-failed | QC-failed | | 26703 | rs10267516 | hapmap | H176 | Pass (0.000) | Pass (0.170) | Pass (0.450) | Pass (0.430) | | 26704 | rs12530718 | validated | H177 | Pass (0.250) | Pass (0.020) | Pass (0.120) | Pass (0.120) | | 26704 | rsERC3512 | bcm-2 | H178 | Pass (0.020) | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26705 | rsERC3514 | bcm-1 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.000) | | 26705 | rs213514 | validated | H082 | Pass (0.420) | Pass (0.310) | Pass (0.440) | Pass (0.360) | | 26705 | rsERC3515 | bcm-1 | H178 | Pass (0.010) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26705 | rs10272279 | validated | H172 | Pass (0.040) | Pass (0.210) | Pass (0.270) | Pass (0.200) | | 26705 | rs1498922 | validated | H149 | Pass (0.250) | QC-failed | Pass (0.110) | Pass (0.120) | | 26705 | rsERO8 | bcm-1 | H178 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.010) | | 26706 | rsERO9 | bcm-1 | H178 | Pass (0.000) | Pass (0.000) | QC-failed | QC-failed | | 26706 | rsERY11 | bcm-2 | H178 | Pass (0.000) | QC-failed | Pass (0.060) | Pass (0.040) | | 26706 | rs11762308 | validated | H172 | Pass (0.080) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26706 | rsERY12 | bcm-3 | H178 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26706 | rsERC3519 | bcm-1 | H178 | Pass (0.030) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26708 | rs1030649 | tsc-overlap | H152 | Pass (0.000) | Pass (0.000) | Pass (0.020) | Pass (0.000) | | 26709 | rs1030650 | tsc-overlap | H156 | Pass (0.000) | In-progress | In-progress | In-progress | | 26709 | rsERC3523 | bcm-1 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26710 | rs213515 | validated | H139 | Pass (0.160) | Pass (0.290) | Pass (0.000) | Pass (0.010) | | 26711 | rs4722648 | bac-overlap | H152 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26711 | rsERO13 | bcm-2 | H185 | Pass (0.000) | DCC-failed | Pass (0.010) | Pass (0.000) | | 26711 | rsERY18 | bcm-2 | H183 | Pass (0.000) | QC-failed | Pass (0.040) | Pass (0.030) | | 26712 | rs213516 | validated | H152 | Pass (0.180) | Pass (0.490) | Pass (0.330) | Pass (0.210) | | 26712 | rsERY19 | bcm-1 | H180 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.000) | | 26712 | rsERC3525 | bcm-4 | H185 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26712 | rsERC3526 | bcm-1 | H182 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26712 | rs213517 | validated | H152 | Pass (0.070) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26712 | rsERC3527 | bcm-3 | H183 | QC-failed | QC-failed | Pass (0.000) | Pass (0.000) | | 26712 | rsERC3528 | bcm-3 | H178 | Pass (0.000) | DCC-failed | Pass (0.000) | Pass (0.000) | | 26712 | rsERY20 | bcm-1 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26712 | rsERY21 | bcm-1 | H182 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26712 | rsERC3529 | bcm-3 | H183 | Pass (0.020) | QC-failed | Pass (0.010) | Pass (0.000) | | 26714 | rs213518 | validated | H149 | Pass (0.180) | Pass (0.270) | Pass (0.000) | Pass (0.000) | | 26714 | rs213519 | two-hit | H156 | Pass (0.120) | In-progress | In-progress | In-progress | | 26715 | rs12534901 | validated | H183 | Pass (0.220) | Pass (0.000) | Pass (0.120) | Pass (0.130) | | 26715 | rs4722649 | validated | H089 | Pass (0.000) | Pass (0.150) | Pass (0.000) | Pass (0.000) | | 26715 | rs4722650 | validated | H152 | Pass (0.000) | Pass (0.150) | Pass (0.000) | Pass (0.000) | | 26716 | rs213520 | validated | H152 | Pass (0.400) | Pass (0.450) | Pass (0.400) | Pass (0.350) | | 26716 | rs213521 | validated | H149 | Pass (0.160) | Pass (0.280) | Pass (0.000) | Pass (0.010) | | 26718 | rs6461981 | two-hit | H157 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26719 | rsERC3539 | bcm-1 | H180 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.000) | | 26719 | rsERY42 | bcm-1 | H180 | Pass (0.000) | Pass (0.010) | DCC-failed | DCC-failed | | 26720 | rs2088587 | tsc-overlap | U001 | QC-failed | In-progress | In-progress | In-progress | | 26721 | rs2936421 | bac-overlap | H149 | Pass (0.000) | Pass (0.000) | QC-failed | QC-failed | | 26721 | rs2936422 | bac-overlap | H149 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26722 | rs2936423 | validated | H152 | Pass (0.160) | Pass (0.290) | QC-failed | QC-failed | | 26722 | rsERC3546 | bcm-1 | H182 | Pass (0.000) | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26723 | rs4722651 | bac-overlap | H152 | Pass (0.000) | Pass (0.160) | Pass (0.000) | Pass (0.000) | | 26723 | rs2936424 | validated | H133 | Pass (0.170) | Pass (0.490) | Pass (0.300) | Pass (0.220) | | 26723 | rs10244751 | validated | H172 | Pass (0.220) | Pass (0.000) | Pass (0.120) | Pass (0.120) | | 26723 | rs2936425 | two-hit | H149 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26724 | rs2960784 | validated | H157 | Pass (0.400) | Pass (0.320) | Pass (0.420) | Pass (0.360) | | 26724 | rs10281414 | hapmap | H170 | Pass (0.000) | QC-failed | QC-failed | QC-failed | | 26724 | rs10281417 | hapmap | H177 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26725 | rs2960785 | validated | H149 | Pass (0.420) | Pass (0.320) | Pass (0.430) | Pass (0.350) | | 26726 | rs1874924 | validated | H156 | QC-failed | In-progress | In-progress | In-progress | | 26726 | rsERY50 | bcm-1 | H180 | Pass (0.000) | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26726 | rsERC3554 | bcm-2 | H182 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26726 | rs2030137 | validated | H157 | Pass (0.430) | Pass (0.320) | Pass (0.420) | Pass (0.350) | | 26726 | rs2960786 | validated | H154 | Pass (0.380) | Pass (0.320) | Pass (0.420) | Pass (0.360) | | 26727 | rs7807198 | two-hit | H149 | Pass (0.420) | Pass (0.320) | Pass (0.430) | Pass (0.370) | | 26727 | rs12537652 | hapmap | H177 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26727 | rsERY51 | bcm-1 | H183 | QC-failed | QC-failed | QC-failed | QC-failed | | 26727 | rs13311400 | non-validated | H178 | Pass (0.400) | Pass (0.320) | Pass (0.380) | Pass (0.380) | | 26728 | rsERC3557 | bcm-2 | H180 | QC-failed | QC-failed | QC-failed | QC-failed | | 26728 | rsERO18 | bcm-0 | H180 | QC-failed | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26729 | rs2936426 | validated | H133 | Pass (0.410) | Pass (0.310) | Pass (0.440) | Pass (0.370) | | 26729 | rsERC3559 | bcm-1 | H180 | Pass (0.010) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26730 | rs2259141 | two-hit | H121 | Pass (0.000) | Pass (0.490) | Pass (0.270) | Pass (0.200) | | 26730 | rsERY54 | bcm-1 | H180 | QC-failed | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26730 | rsERY56 | bcm-1 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26731 | rs11563615 | hapmap | H177 | Pass (0.000) | Pass (0.030) | Pass (0.000) | Pass (0.000) | | 26731 | rs2693665 | validated | H156 | QC-failed | In-progress | In-progress | In-progress | | 26732 | rs774264 | validated | H074 | Pass (0.420) | Pass (0.320) | Pass (0.430) | Pass (0.370) | | 26732 | rs774265 | validated | H075 | Pass (0.160) | Pass (0.280) | Pass (0.000) | Pass (0.010) | | 26733 | rs2712242 | validated | H075 | Pass (0.220) | Pass (0.000) | Pass (0.120) | Pass (0.120) | | 26733 | rsERC3561 | bcm-1 | H180 | Pass (0.030) | Pass (0.000) | Pass (0.330) | Pass (0.250) | | 26733 | rs6945174 | hapmap | H074 | Pass (0.000) | Pass (0.150) | Pass (0.000) | Pass (0.000) | | 26735 | rs774266 | validated | H075 | Pass (0.180) | Pass (0.490) | Pass (0.280) | Pass (0.210) | | 26735 | rsERY61 | bcm-3 | H183 | QC-failed | QC-failed | QC-failed | QC-failed | | 26736 | rs13229517 | non-validated | H183 | QC-failed | QC-failed | QC-failed | QC-failed | | 26736 | rs774267 | validated | H149 | Pass (0.430) | Pass (0.310) | Pass (0.430) | Pass (0.360) | | 26737 | rs11563614 | hapmap | H172 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26737 | rs774268 | validated | H075 | Pass (0.150) | Pass (0.260) | Pass (0.000) | Pass (0.010) | | 26737 | rs774269 | validated | H074 | Pass (0.410) | Pass (0.320) | Pass (0.430) | Pass (0.350) | | 26737 | rsERY66 | bcm-0 | H180 | Pass (0.010) | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26738 | rsERO23 | bcm-1 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.000) | | 26738 | rsERC3563 | bcm-4 | H178 | Pass (0.230) | DCC-failed | Pass (0.120) | Pass (0.120) | | 26738 | rsERY68 | bcm-2 | H180 | QC-failed | Pass (0.050) | QC-failed | QC-failed | | 26739 | rsERY69 | bcm-2 | H178 | QC-failed | QC-failed | QC-failed | QC-failed | | 26739 | rs2462904 | validated | H074 | Pass (0.250) | Pass (0.000) | Pass (0.110) | Pass (0.120) | | 26739 | rsERY75 | bcm-1 | H180 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26739 | rsERC3572 | bcm-1 | H178 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26739 | rsERY76 | bcm-1 | H178 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26740 | rs774263 | validated | H074 | Pass (0.170) | Pass (0.490) | Pass (0.280) | Pass (0.220) | | 26740 | rs774262 | validated | H074 | Pass (0.160) | Pass (0.290) | Pass (0.010) | Pass (0.010) | | 26741 | rsERY79 | bcm-2 | H183 | Pass (0.000) | Pass (0.030) | Pass (0.000) | Pass (0.000) | | 26741 | rsERC3574 | bcm-1 | H180 | Pass (0.010) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26741 | rsERC3575 | bcm-1 | H182 | Pass (0.010) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26741 | rsERY80 | bcm-3 | H180 | Pass (0.000) | Pass (0.170) | QC-failed | QC-failed | | 26742 | rs774261 | validated | H076 | Pass (0.160) | QC-failed | QC-failed | QC-failed | | 26742 | rs706019 | validated | H075 | Pass (0.150) | Pass (0.330) | Pass (0.280) | Pass (0.220) | | 26742 | rs2462910 | validated | H076 | Pass (0.220) | QC-failed | Pass (0.120) | Pass (0.130) | | 26742 | rsERY81 | bcm-1 | H178 | Pass (0.010) | DCC-failed | Pass (0.000) | Pass (0.000) | | 26743 | rs2391368 | tsc-overlap | H075 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26743 | rs2391369 | tsc-overlap | H075 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26745 | rsERC3582 | bcm-8 | H178 | Pass (0.000) | DCC-failed | Pass (0.000) | Pass (0.000) | | 26745 | rsERY88 | bcm-1 | H180 | QC-failed | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26746 | rsERY89 | bcm-1 | H178 | Pass (0.010) | Pass (0.010) | Pass (0.030) | Pass (0.010) | | 26746 | rsERY90 | bcm-1 | H182 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26748 | rsERC3585 | bcm-1 | H180 | QC-failed | QC-failed | QC-failed | QC-failed | | 26749 | rs2712244 | validated | H075 | Pass (0.220) | Pass (0.000) | Pass (0.120) | Pass (0.120) | | 26749 | rsERC3589 | bcm-2 | H182 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26749 | rsERC3590 | bcm-2 | H182 | Pass (0.010) | Pass (0.000) | Pass (0.000) | Pass (0.010) | | 26749 | rsERC3591 | bcm-2 | H178 | Pass (0.000) | Pass (0.010) | Pass (0.010) | Pass (0.030) | | 26749 | rsERC3592 | bcm-1 | H183 | QC-failed | QC-failed | QC-failed | QC-failed | | 26749 | rsERC3593 | bcm-1 | H182 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26749 | rs4722652 | two-hit | H149 | Pass (0.000) | Pass (0.150) | QC-failed | QC-failed | | 26749 | rsERC3595 | bcm-2 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26749 | rs774259 | validated | H149 | Pass (0.160) | Pass (0.280) | Pass (0.000) | Pass (0.010) | | 26750 | rs774258 | validated | H152 | Pass (0.160) | Pass (0.260) | QC-failed | QC-failed | | 26750 | rs4722653 | bac-overlap | H150 | Pass (0.000) | Pass (0.160) | Pass (0.000) | Pass (0.000) | | 26750 | rs774257 | validated | H075 | Pass (0.000) | QC-failed | QC-failed | QC-failed | | 26750 | rs7457265 | bac-overlap | H074 | Pass (0.010) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26752 | rs6967844 | non-validated | H156 | QC-failed | In-progress | In-progress | In-progress | | 26752 | rs6948052 | hapmap | H154 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26752 | rs2133352 | bac-overlap | H150 | QC-failed | In-progress | In-progress | In-progress | | 26753 | rs799271 | bac-overlap | H152 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26753 | rs812283 | bac-overlap | H150 | QC-failed | In-progress | In-progress | In-progress | | 26753 | rs813500 | bac-overlap | H150 | QC-failed | In-progress | In-progress | In-progress | | 26753 | rs11976399 | non-validated | H180 | QC-failed | QC-failed | QC-failed | QC-failed | | 26754 | rs5883057 | non-validated | U001 | QC-failed | In-progress | In-progress | In-progress | | 26754 | rs1082312 | two-hit | U001 | QC-failed | In-progress | In-progress | In-progress | | 26756 | rs774244 | validated | H074 | Pass (0.170) | Pass (0.500) | Pass (0.290) | Pass (0.200) | | 26757 | rs12671321 | hapmap | H172 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26759 | rs774245 | validated | H152 | Pass (0.190) | Pass (0.340) | Pass (0.340) | Pass (0.250) | | 26759 | rs1852308 | tsc-overlap | H152 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26760 | rs11977305 | hapmap | H172 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26761 | rs5883058 | non-validated | U001 | DCC-failed | Pass (0.000) | QC-failed | QC-failed | | 26762 | rs2712245 | validated | H075 | Pass (0.210) | Pass (0.000) | Pass (0.120) | Pass (0.120) | | 26762 | rs2693662 | validated | H075 | Pass (0.220) | QC-failed | QC-failed | QC-failed | | 26763 | rsERO58 | bcm-1 | H178 | Pass (0.000) | DCC-failed | Pass (0.000) | Pass (0.000) | | 26764 | rs774246 | validated | H074 | Pass (0.160) | Pass (0.280) | Pass (0.000) | Pass (0.000) | | 26764 | rs10227988 | hapmap | H172 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26765 | rsERY109 | bcm-1 | H178 | DCC-failed | DCC-failed | Pass (0.000) | Pass (0.000) | | 26765 | rsERC3598 | bcm-1 | H180 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26766 | rs12113781 | non-validated | H178 | Pass (0.010) | QC-failed | QC-failed | QC-failed | | 26766 | rsERO61 | bcm-1 | H185 | Pass (0.000) | Pass (0.010) | Pass (0.060) | Pass (0.010) | | 26766 | rs774247 | validated | H152 | Pass (0.160) | Pass (0.280) | Pass (0.000) | Pass (0.000) | | 26767 | rs774248 | validated | H076 | Pass (0.420) | QC-failed | Pass (0.460) | Pass (0.360) | | 26767 | rsERC3600 | bcm-1 | H180 | Pass (0.020) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26767 | rsERC3601 | bcm-1 | H182 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.010) | | 26768 | rs4304240 | bac-overlap | H076 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26768 | rs6948809 | hapmap | H074 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26768 | rs13222684 | non-validated | H180 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.000) | | 26768 | rs13307565 | non-validated | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26768 | rs2462911 | bac-overlap | H154 | QC-failed | In-progress | In-progress | In-progress | | 26768 | rs2462912 | bac-overlap | H152 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26768 | rsERY111 | bcm-1 | H182 | Pass (0.000) | Pass (0.040) | Pass (0.000) | Pass (0.000) | | 26768 | rs13307625 | non-validated | H183 | QC-failed | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26768 | rs2462913 | bac-overlap | H155 | Pass (0.000) | Pass (0.000) | QC-failed | QC-failed | | 26769 | rs2648079 | validated | H076 | Pass (0.190) | Pass (0.480) | Pass (0.280) | Pass (0.220) | | 26769 | rsERC3604 | bcm-8 | H180 | Pass (0.000) | QC-failed | Pass (0.010) | Pass (0.010) | | 26770 | rs10227553 | hapmap | H176 | Pass (0.000) | Pass (0.000) | Pass (0.430) | Pass (0.360) | | 26770 | rs10241404 | non-validated | H180 | QC-failed | QC-failed | QC-failed | QC-failed | | 26770 | rs10227807 | non-validated | H183 | QC-failed | QC-failed | QC-failed | QC-failed | | 26770 | rs10271098 | non-validated | H178 | QC-failed | QC-failed | QC-failed | QC-failed | | 26770 | rs10227897 | non-validated | H180 | Pass (0.000) | QC-failed | QC-failed | QC-failed | | 26770 | rs5883059 | non-validated | U001 | QC-failed | In-progress | In-progress | In-progress | | 26770 | rs2140999 | tsc-overlap | H074 | QC-failed | In-progress | In-progress | In-progress | | 26771 | rs11563610 | hapmap | H180 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.010) | | 26774 | rsERO63 | bcm-7 | H180 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.010) | | 26775 | rsERC3607 | bcm-1 | H178 | QC-failed | QC-failed | QC-failed | QC-failed | | 26775 | rsERO64 | bcm-1 | H178 | QC-failed | QC-failed | QC-failed | QC-failed | | 26775 | rs812853 | bac-overlap | U001 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26776 | rs774256 | validated | H075 | Pass (0.180) | Pass (0.480) | Pass (0.280) | Pass (0.220) | | 26777 | rsERC3609 | bcm-2 | H180 | Pass (0.030) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26777 | rs706020 | bac-overlap | U001 | Pass (0.000) | Pass (0.000) | QC-failed | QC-failed | | 26785 | rs2693667 | validated | U001 | Pass (0.390) | Pass (0.320) | Pass (0.430) | Pass (0.370) | | 26786 | rs7799480 | validated | U001 | Pass (0.230) | QC-failed | QC-failed | QC-failed | | 26786 | rs7781077 | validated | U001 | Pass (0.200) | Pass (0.000) | Pass (0.120) | Pass (0.120) | | 26787 | rs2693669 | validated | U001 | Pass (0.180) | Pass (0.460) | Pass (0.280) | Pass (0.180) | | 26787 | rs774249 | validated | H117 | Pass (0.170) | Pass (0.490) | Pass (0.280) | Pass (0.210) | | 26788 | rs706015 | validated | H155 | Pass (0.160) | Pass (0.330) | Pass (0.000) | Pass (0.000) | | 26788 | rs10247919 | hapmap | H175 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26788 | rs774250 | validated | H074 | Pass (0.140) | Pass (0.490) | Pass (0.280) | Pass (0.230) | | 26789 | rs774251 | validated | H154 | Pass (0.170) | Pass (0.490) | Pass (0.300) | Pass (0.210) | | 26790 | rs11563607 | hapmap | H170 | Pass (0.000) | Pass (0.000) | QC-failed | QC-failed | | 26790 | rs774252 | validated | H152 | Pass (0.150) | Pass (0.280) | QC-failed | QC-failed | | 26791 | rs774253 | validated | H152 | Pass (0.180) | QC-failed | Pass (0.280) | Pass (0.160) | | 26791 | rs774254 | validated | H154 | Pass (0.410) | Pass (0.290) | QC-failed | QC-failed | | 26791 | rs774255 | validated | H150 | Pass (0.410) | Pass (0.300) | Pass (0.430) | Pass (0.360) | | 26791 | rsERC3663 | bcm-2 | H178 | DCC-failed | QC-failed | Pass (0.280) | Pass (0.170) | | 26791 | rs4357198 | validated | H150 | Pass (0.220) | Pass (0.000) | Pass (0.090) | Pass (0.100) | | 26792 | rsERY168 | bcm-1 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26792 | rsERY169 | bcm-1 | H182 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26792 | rs2248744 | validated | H157 | Pass (0.240) | QC-failed | Pass (0.120) | Pass (0.120) | | 26792 | rs10242754 | validated | H172 | Pass (0.210) | QC-failed | Pass (0.120) | Pass (0.090) | | 26795 | rs2693660 | validated | H152 | Pass (0.160) | QC-failed | QC-failed | QC-failed | | 26796 | rs6967581 | hapmap | H074 | Pass (0.000) | Pass (0.020) | Pass (0.000) | Pass (0.000) | | 26796 | rs2693661 | validated | H075 | Pass (0.170) | Pass (0.490) | Pass (0.290) | Pass (0.220) | | 26796 | rs2712246 | validated | H152 | Pass (0.220) | Pass (0.000) | Pass (0.120) | Pass (0.100) | | 26796 | rs954051 | validated | H074 | Pass (0.170) | Pass (0.490) | Pass (0.300) | Pass (0.210) | | 26797 | rs12540227 | non-validated | H182 | Pass (0.030) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26797 | rs12540228 | hapmap | H177 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26799 | rs1464969 | validated | H076 | Pass (0.080) | QC-failed | Pass (0.000) | Pass (0.000) | | 26799 | rs1526318 | tsc-overlap | H074 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.010) | | 26800 | rs2140998 | validated | H154 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26800 | rs11563602 | validated | H175 | Pass (0.000) | Pass (0.060) | Pass (0.000) | Pass (0.000) | | 26802 | rs11978883 | hapmap | H170 | Pass (0.000) | Pass (0.030) | QC-failed | QC-failed | | 26802 | rs7791056 | validated | H074 | Pass (0.150) | Pass (0.290) | Pass (0.000) | Pass (0.010) | | 26803 | rs12700771 | non-validated | H184 | QC-failed | QC-failed | QC-failed | QC-failed | | 26804 | rsERY183 | bcm-1 | H178 | Pass (0.030) | QC-failed | Pass (0.040) | Pass (0.000) | | 26804 | rsERO85 | bcm-1 | H183 | Pass (0.000) | Pass (0.010) | Pass (0.010) | Pass (0.000) | | 26804 | rsERC3679 | bcm-1 | H178 | QC-failed | QC-failed | QC-failed | QC-failed | | 26804 | rs2252947 | validated | H076 | Pass (0.410) | Pass (0.290) | Pass (0.450) | Pass (0.360) | | 26805 | rsERO87 | bcm-1 | H184 | DCC-failed | QC-failed | DCC-failed | DCC-failed | | 26805 | rsERO88 | bcm-1 | H180 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.000) | | 26806 | rsERY185 | bcm-7 | H178 | QC-failed | QC-failed | QC-failed | QC-failed | | 26806 | rsERY186 | bcm-1 | H178 | Pass (0.000) | QC-failed | Pass (0.020) | Pass (0.000) | | 26806 | rsERY187 | bcm-3 | H185 | QC-failed | QC-failed | QC-failed | QC-failed | | 26806 | rsERY188 | bcm-2 | H180 | QC-failed | QC-failed | QC-failed | QC-failed | | 26807 | rs7792935 | bac-overlap | H074 | Pass (0.000) | Pass (0.050) | Pass (0.010) | Pass (0.010) | | 26807 | rs7776505 | validated | H074 | Pass (0.150) | Pass (0.260) | Pass (0.000) | Pass (0.000) | | 26807 | rs4601211 | bac-overlap | H074 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.000) | | 26807 | rsERY189 | bcm-1 | H178 | QC-failed | QC-failed | QC-failed | QC-failed | | 26808 | rsERY192 | bcm-7 | H180 | QC-failed | Pass (0.100) | QC-failed | QC-failed | | 26808 | rs2253415 | validated | H051 | Pass (0.240) | Pass (0.000) | Pass (0.110) | Pass (0.120) | | 26809 | rsERC3685 | bcm-3 | H180 | QC-failed | QC-failed | Pass (0.020) | Pass (0.050) | | 26809 | rsERY195 | bcm-3 | H180 | QC-failed | QC-failed | QC-failed | QC-failed | | 26809 | rsERY196 | bcm-1 | H184 | Pass (0.000) | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26810 | rsERC3686 | bcm-2 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26812 | rsERY209 | bcm-3 | H178 | Pass (0.000) | Pass (0.080) | Pass (0.000) | Pass (0.000) | | 26812 | rsERY210 | bcm-1 | H180 | QC-failed | DCC-failed | QC-failed | QC-failed | | 26813 | rs6963821 | non-validated | U001 | Pass (0.020) | QC-failed | Pass (0.000) | Pass (0.010) | | 26814 | rsERY214 | bcm-1 | H184 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26814 | rsERY217 | bcm-1 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26815 | rsERO111 | bcm-1 | H180 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26815 | rsERY219 | bcm-10 | H178 | QC-failed | QC-failed | QC-failed | QC-failed | | 26819 | rsERY224 | bcm-2 | H184 | QC-failed | QC-failed | QC-failed | QC-failed | | 26819 | rsERC3694 | bcm-1 | H183 | Pass (0.000) | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26820 | rsERY226 | bcm-1 | H178 | Pass (0.000) | DCC-failed | Pass (0.000) | Pass (0.000) | | 26822 | rsERC3697 | bcm-2 | H178 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26824 | rsERY229 | bcm-1 | H184 | QC-failed | QC-failed | QC-failed | QC-failed | | 26824 | rsERY230 | bcm-2 | H184 | QC-failed | QC-failed | QC-failed | QC-failed | | 26824 | rsERY231 | bcm-1 | H178 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26825 | rs6961752 | validated | U001 | Pass (0.300) | Pass (0.010) | Pass (0.120) | Pass (0.120) | | 26825 | rs6944267 | validated | U001 | Pass (0.410) | Pass (0.290) | Pass (0.430) | Pass (0.370) | | 26825 | rs6967080 | hapmap | U001 | Pass (0.000) | Pass (0.030) | Pass (0.000) | Pass (0.000) | | 26827 | rs6977402 | two-hit | U001 | Pass (0.000) | Pass (0.000) | Pass (0.480) | Pass (0.490) | | 26828 | rsERC3702 | bcm-1 | H183 | Pass (0.010) | Pass (0.000) | Pass (0.000) | Pass (0.010) | | 26828 | rsERO114 | bcm-1 | H178 | Pass (0.000) | Pass (0.000) | Pass (0.020) | Pass (0.030) | | 26831 | rsERY236 | bcm-5 | H178 | Pass (0.000) | Pass (0.120) | Pass (0.000) | Pass (0.010) | | 26833 | rs2428420 | bac-overlap | H150 | QC-failed | In-progress | In-progress | In-progress | | 26833 | rs10266096 | validated | H170 | Pass (0.210) | QC-failed | Pass (0.110) | Pass (0.120) | | 26834 | rs2522823 | validated | H150 | Pass (0.410) | Pass (0.300) | Pass (0.430) | Pass (0.360) | | 26835 | rs2522824 | validated | H076 | Pass (0.290) | Pass (0.000) | Pass (0.130) | Pass (0.120) | | 26835 | rs7783040 | bac-overlap | H074 | Pass (0.000) | Pass (0.100) | Pass (0.000) | Pass (0.000) | | 26835 | rs3915202 | two-hit | H152 | Pass (0.000) | Pass (0.000) | QC-failed | QC-failed | | 26835 | rsERY239 | bcm-1 | H178 | Pass (0.000) | Pass (0.020) | Pass (0.000) | Pass (0.000) | | 26835 | rsERY240 | bcm-2 | H180 | Pass (0.000) | Pass (0.030) | QC-failed | QC-failed | | 26836 | rs2462901 | validated | H074 | Pass (0.410) | Pass (0.270) | Pass (0.430) | Pass (0.390) | | 26837 | rs2428430 | validated | H023 | Pass (0.390) | Pass (0.170) | Pass (0.440) | Pass (0.350) | | 26837 | rs13221187 | non-validated | H182 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26838 | rs799238 | validated | H154 | Pass (0.080) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26838 | rs10257437 | validated | H170 | Pass (0.160) | QC-failed | QC-failed | QC-failed | | 26839 | rs10257464 | validated | H176 | Pass (0.130) | Pass (0.400) | Pass (0.000) | Pass (0.000) | | 26839 | rs2465263 | validated | H074 | Pass (0.410) | Pass (0.300) | Pass (0.470) | Pass (0.370) | | 26839 | rs11564070 | hapmap | H177 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26840 | rs7780915 | bac-overlap | H076 | Pass (0.000) | Pass (0.180) | Pass (0.000) | Pass (0.000) | | 26840 | rs2522829 | validated | H048 | Pass (0.410) | Pass (0.310) | Pass (0.440) | Pass (0.360) | | 26840 | rs13438531 | non-validated | H182 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26841 | rs2462902 | validated | H152 | Pass (0.300) | QC-failed | Pass (0.130) | Pass (0.130) | | 26841 | rs2254463 | validated | H150 | Pass (0.310) | Pass (0.000) | Pass (0.120) | Pass (0.100) | | 26841 | rsERY242 | bcm-3 | H183 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26841 | rs2522822 | validated | H157 | Pass (0.410) | Pass (0.490) | Pass (0.400) | Pass (0.350) | | 26842 | rs2428416 | validated | H150 | Pass (0.230) | QC-failed | Pass (0.120) | Pass (0.130) | | 26843 | rs2301719 | validated | H021 | Pass (0.030) | QC-failed | QC-failed | QC-failed | | 26844 | rs2465264 | validated | H152 | Pass (0.220) | Pass (0.000) | Pass (0.120) | Pass (0.120) | | 26844 | rs2465265 | validated | H074 | Pass (0.380) | Pass (0.430) | QC-failed | QC-failed | | 26845 | rs10231265 | validated | H172 | Pass (0.380) | Pass (0.430) | Pass (0.430) | Pass (0.360) | | 26845 | rs11563327 | validated | H172 | Pass (0.210) | QC-failed | Pass (0.120) | Pass (0.120) | | 26845 | rs1983471 | perlegen-verified | H074 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26845 | rs11564067 | hapmap | H176 | Pass (0.020) | Pass (0.000) | Pass (0.000) | Pass (0.010) | | 26845 | rsERY245 | bcm-0 | H182 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.010) | | 26846 | rs13232336 | non-validated | H180 | QC-failed | QC-failed | QC-failed | QC-failed | | 26846 | rs13234954 | non-validated | H180 | QC-failed | QC-failed | QC-failed | QC-failed | | 26846 | rs799232 | bac-overlap | H152 | Pass (0.000) | QC-failed | QC-failed | QC-failed | | 26846 | rs6946148 | hapmap | H152 | Pass (0.000) | QC-failed | QC-failed | QC-failed | | 26846 | rs799233 | two-hit | H150 | Pass (0.000) | QC-failed | Pass (0.000) | Pass (0.000) | | 26846 | rs799234 | validated | H150 | QC-failed | In-progress | In-progress | In-progress | | 26846 | rs799235 | validated | H076 | Pass (0.030) | Pass (0.410) | Pass (0.030) | Pass (0.020) | | 26848 | rsERY247 | bcm-2 | H178 | Pass (0.000) | QC-failed | DCC-failed | DCC-failed | | 26849 | rsERY249 | bcm-2 | H178 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26850 | rs2428417 | validated | U001 | Pass (0.220) | Pass (0.000) | Pass (0.100) | Pass (0.120) | | 26850 | rs2465267 | validated | U001 | Pass (0.390) | QC-failed | QC-failed | QC-failed | | 26850 | rsERY252 | bcm-1 | H180 | Pass (0.000) | QC-failed | QC-failed | QC-failed | | 26850 | rsERY253 | bcm-1 | H185 | Pass (0.000) | QC-failed | QC-failed | QC-failed | | 26850 | rs10230551 | hapmap | H176 | Pass (0.000) | Pass (0.000) | Pass (0.010) | Pass (0.000) | | 26850 | rsERY254 | bcm-2 | H182 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26851 | rs2712241 | validated | H065 | Pass (0.400) | Pass (0.450) | Pass (0.430) | Pass (0.350) | | 26851 | rs1725070 | bac-overlap | H150 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26851 | rs13233971 | non-validated | H184 | QC-failed | QC-failed | QC-failed | QC-failed | | 26851 | rs13234256 | non-validated | H178 | Pass (0.010) | Pass (0.000) | Pass (0.020) | Pass (0.000) | | 26851 | rs2693666 | validated | H075 | Pass (0.400) | Pass (0.310) | Pass (0.420) | Pass (0.380) | | 26852 | rs2428418 | validated | H074 | Pass (0.300) | Pass (0.000) | Pass (0.100) | Pass (0.120) | | 26854 | rs6961068 | hapmap | H150 | Pass (0.000) | Pass (0.150) | Pass (0.000) | Pass (0.000) | | 26855 | rsERC3716 | bcm-8 | H178 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26855 | rsERY256 | bcm-1 | H178 | Pass (0.000) | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26855 | rs2712250 | validated | H154 | Pass (0.300) | Pass (0.000) | Pass (0.110) | Pass (0.120) | | 26855 | rsERC3718 | bcm-0 | H178 | Pass (0.000) | Pass (0.000) | Pass (0.000) | Pass (0.000) | | 26855 | rs5003227 | hapmap | H075 | Pass (0.000) | QC-failed | QC-failed | QC-failed | | 26856 | rs5003224 | non-validated | H152 | QC-failed | In-progress | In-progress | In-progress | | 26856 | rsERC3720 | bcm-1 | H182 | QC-failed | Pass (0.010) | Pass (0.000) | Pass (0.000) | | 26856 | rs5003223 | non-validated | H155 | QC-failed |
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