chrom chr_pos cM_min cM_max ultra_contig contig_pos snp_id alleles pcr_p1 pcr_p2 product_size enzyme af16_bands hk104_bands chrI 761399 2.69 2.69 cb25.fpc4101 96972 cb62039 T/G ATTGATCTCTCTCGGCTTCT ACCGTATCAGTACTTTTTGAATG 651 bp BstUI 271,380 271,227,153 chrI 762207 2.69 2.69 cb25.fpc4101 97780 cb62058 T/G CCAGCTCTCTTGGTTCTATG GGAAGACCGTGCTGTTATTAT 635 bp BstUI 316,120,199 316,26,94,199 chrI 2595262 13.45 13.45 cb25.fpc4321 1363609 cb66904 G/A AACATTCGAACCTCCTTATTTT GGAAAATGAGGAAAAATTAGTCT 748 bp BstUI 491,257 748 chrI 9143754 21.23 21.23 cb25.fpc2032 65118 cb19668 C/T AGTGTCACGATTTGGAATTAGTA AATACGCAATTCTTGATTCATT 744 bp BstUI 489,255 744 chrI 9640207 21.82 21.82 cb25.fpc3441 149635 cb55696 A/C ATATCGATTTTTCAGTACGGTCT TTTTACAGATTTTCAATTCTCAAG 749 bp BstUI 348,12,389 120,228,12,389 chrI 10717431 43.93 43.93 cb25.fpc4140 557413 cb852 G/A ATGTGTCTTACTGAGCCTTACC GTCTACACGAAAATGAATGACTC 750 bp BstUI 23,396,224,107 23,620,107 chrI 11109667 43.93 43.93 cb25.fpc4140 165177 cb700 A/G TGGAATTTTGAAATGTCTAAGAG AACCTATTGGAAGTGGAATGTAT 747 bp BstUI 747 337,68,342 chrI 11109738 43.93 43.93 cb25.fpc4140 165106 cb695 T/C TGGAATTTTGAAATGTCTAAGAG AACCTATTGGAAGTGGAATGTAT 747 bp BstUI 747 337,68,342 chrI 11126003 43.93 43.93 cb25.fpc4140 148841 cb688 A/G GAGAGTGCTCTTGCTCTTGA CAGGAGAAGGAGGAAGAGTT 746 bp BstUI 522,114,110 345,177,114,110 chrII 1447170 2.381 2.381 cb25.fpc4168 69856 cb36636 T/C CGTGCCATCATATGTATAAAGTT CTCAATACTAATTGCTTTGTCGT 740 bp BstUI 54,572,114 54,215,357,114 chrII 4197180 11.878 13.098 cb25.fpc0011 5043 cb27917 C/T TTTGTTAAGCGTCATGAGTGT GTCTTAAGATGCTCCGAGAAC 831 bp BstUI 434,74,323 508,323 chrII 4307430 18.165 18.165 cb25.fpc0072 105108 cb3399 A/G TTTGACCAAAAATTCTGAAAA AAATCAATGTCAGAGACAGAAAA 750 bp BstUI 662,25,63 272,390,25,63 chrII 4539510 18.165 18.165 cb25.fpc0072 337188 cb3417 T/C CACATGATAATACAAATGGGTCT AAATCTGATGACATTTTCATTGT 748 bp BstUI 107,601,40 107,354,247,40 chrII 4572420 18.165 18.165 cb25.fpc0072 370098 cb25481 C/T CGAATTCTACAGTAATCAAGACC AGCTGATCGATGTGTAGGAG 706 bp BstUI 303,403 706 chrII 6939313 21.280 26.584 cb25.fpc0058 3024283 cb43520 C/T AAAAAGTACCTGGAGTGTCAACT AATGAAAAATATTGACTGGATGA 750 bp BstUI 497,253 750 chrII 10717513 27.918 33.950 cb25.fpc4206 753818 cb64513 G/A TGTGGATAACTGGTTCATAGAAT GCTTTCTCTGCTGATAAAACAT 750 bp BstUI 307,291,152 598,152 chrII 13633231 49.961 49.961 cb25.fpc0305 879745 cb47569 C/T GATTCTTCGCCTAATTGAGAA GTACTCCTTTTCCAGTTTCTCTT 560 bp BstUI 60,500 560 chrII 14249181 49.961 49.961 cb25.fpc0305 263795 cb12992 T/C CCTTTCTTCTGTGTAGTTTCTATG GGCCTACATTAAAATCTCTTCTT 752 bp BstUI 752 262,490 chrII 14310624 49.961 49.961 cb25.fpc0305 202352 cb12980 A/G CAGTTATTTTGTAACGTGGAGAT AAATCTTTCTGAAGAATCTGTGA 749 bp BstUI 479,270 424,55,270 chrIII 1454699 6.07 6.07 cb25.fpc2587 410984 cb53120 G/T TGAAACTTTTATCTCCTGATACG TGATAATTAACTTTCTGCTCATGT 751 bp BstUI 91,267,36,357 91,303,357 chrIII 1494248 6.07 6.07 cb25.fpc2587 371435 cb53083 G/C GGTTACTGTAGCTCTGGGTTACT AAAATCGTGGAATGTCATTTT 686 bp BstUI 200,486 686 chrIII 2534498 16.84 17.45 cb25.fpc2187 672625 cb50029 T/G GAATATTCTGATTTTCAACGATTT AACAGGTCTGCAGAAGAATATC 708 bp BstUI 708 221,487 chrIII 2666813 16.84 17.45 cb25.fpc2187 540310 cb49932 G/A GAAAAATCCTATTTCCAGTTGTC CATTTGAATACTCACCAATTTTC 628 bp BstUI 345,283 628 chrIII 2881846 16.84 17.45 cb25.fpc2187 325277 cb49854 T/G AACGAGGTGATGATTAATTTAGA AGAATTCAAACAAAAACGAAAG 750 bp BstUI 236,514 236,90,424 chrIII 3765551 21.77 21.77 cb25.fpc2976 268258 cb12099 C/G GCGGATTATATCTGTAATCGTAA ATTCCATAATGAGCTGAAATCTT 749 bp BstUI 261,488 749 chrIII 6796547 24.84 24.84 cb25.fpc4079 5512 cb38984 C/T GTCTAGATGAGCAATCATCTTTC ATTAATTTCGAAGATTTCAGATG 747 bp BstUI 268,401,78 669,78 chrIII 7105231 24.84 24.84 cb25.fpc4079 314196 cb22105 C/A CCACTACGGAACTCATTATTCTA GATGTGGTAGTTGATGGAAAGT 748 bp BstUI 449,299 748 chrIII 11116517 36.53 36.53 cb25.fpc4224 453541 cb64966 A/G GGTGTTCCCTCTTGATATTTAAC AGCTTTTACTGCTTTTCATGTAG 740 bp BstUI 740 266,474 chrIV 1674325 2.5647 5.0969 cb25.fpc3752 1161896 cb39559 T/G TTTAATAGAGCGTTGTTTCAACT CTATTCGCCAATCGTATTATCT 750 bp BstUI 750 493,257 chrIV 2263173 7.8753 7.8753 cb25.fpc4250 452986 cb8944 C/T TCCAAGATTCTGATTTGGTTAT AAAATGATTTCTTTTTGGAGATT 750 bp BstUI 305,52,2,391 305,52,393 chrIV 2663766 9.1912 9.776 cb25.fpc4118 262652 cb8182 C/G TTGAACAATTCAAACAATTCAC ATGTCGAACTAGAAAACAACAGA 564 bp BstUI 438,63,63 438,126 chrIV 4306154 17.6194 17.6194 cb25.fpc4260 362939 cb65876 G/C CCTACCTCATCAGTGTCCTTA ATTTTCGTCGAGAAGTACGAT 746 bp BstUI 24,722 24,304,418 chrIV 5040724 18.1974 18.1974 cb25.fpc0143 1688747 cb46813 A/G AAAATGACGTTTTCGTTTACTTA GTAAAATGTTGGATGATTTTGAA 749 bp BstUI 749 359,390 chrIV 6808664 18.1974 18.1974 cb25.fpc0110 79094 cb46076 T/C TAATGAAAAAGAAGTGGTTCTGA TTCCAAAATTGTCAGTTAAAAAC 750 bp BstUI 750 308,442 chrIV 7201948 18.1974 18.1974 cb25.fpc0110 472378 cb46150 G/T TTTAATCAATTCTGATCTTGTACG AATCTTCAAAGAAACACCAAAC 746 bp BstUI 464,282 746 chrIV 7745966 18.1974 18.1974 cb25.fpc0063 384044 cb30392 T/G AAGATAGAGCATCTGAATGTGAA ATACTCGTCATAAAGGGAGAGAT 747 bp BstUI 747 478,269 chrIV 9074960 18.1974 18.1974 cb25.fpc4152 945539 cb63548 C/A TACACAAATTTGCAGTTATTTGA TGTAATACTCATGCTAACTCTGAAA 740 bp BstUI 172,120,448 172,568 chrIV 10454689 18.1974 18.8686 cb25.fpc0039 186778 cb32781 A/G AGGAAATGATAAGAGCAGAAAAC TTTTGATTAGACAGACAAACAATC 749 bp BstUI 42,166,541 42,166,86,455 chrIV 11325303 20.018 20.018 cb25.fpc0081 153202 cb16170 C/T AAACAAATTAACTCACCTCCTCT GCCTGAAGATTACTGTAGATTTG 748 bp BstUI 463,285 748 chrIV 11325304 20.018 20.018 cb25.fpc0081 153203 cb16171 G/A AAACAAATTAACTCACCTCCTCT GCCTGAAGATTACTGTAGATTTG 748 bp BstUI 463,285 748 chrIV 11853862 20.018 20.018 cb25.fpc1570 39790 cb48852 C/G AGATGATGGCGATGATATTC ACATTTGACTGACTAAACGACAC 751 bp BstUI 291,460 751 chrIV 12676674 20.6028 20.6028 cb25.fpc4090 256220 cb33468 C/T TCTTCCACCTCTATTTTTCATC ATCATGAAATCCTGGAAAAAC 750 bp BstUI 282,468 750 chrIV 13498709 30.9568 30.9568 cb25.fpc0107 45427 cb45942 G/C GAGTCTCGATTTCTCCTAACAG CTTAAAATGAGCCAAGAATCAC 748 bp BstUI 308,96,344 308,96,90,254 chrIV 13848540 37.5236 41.1551 cb25.fpc3835 550116 cb56095 T/C TAAGAACACACAGCATAATTGAA GACAGTTTTTCACAGAGTTTCAG 750 bp BstUI 123,627 123,317,310 chrIV 14728192 43.5529 44.1377 cb25.fpc4347 100204 cb67413 G/A AAAGTTTTTGTTTAAACCCTTTC CTTGAGTTTTAGCTCTCCAGTC 749 bp BstUI 343,307,99 650,99 chrV 2839816 6.9679 6.9679 cb25.fpc2310 10541 cb8295 T/C TGAAGCTCTATCTTCAAAACAAG TTTATATACTACGCACGTTTCAA 751 bp BstUI 751 462,289 chrV 3989237 8.2837 8.2837 cb25.fpc0023 527266 cb26645 T/C CATCATAACCATCATAGGTTCC TTTGTTTATTTGAATTTCCAGTC 749 bp BstUI 749 280,469 chrV 4011497 8.2837 8.2837 cb25.fpc0023 549526 cb4878 A/G TCATTTCCAATTATCAGATTTTC CCAACACGAGACAACATAAATA 749 bp BstUI 193,556 193,293,263 chrV 4318019 8.2837 8.2837 cb25.fpc0023 856048 cb26713 C/T CACGTTTTTGGTAAAAATTTAGT GACAGCTGATTTGTTTTTCAGT 749 bp BstUI 184,77,127,361 184,77,488 chrV 4318020 8.2837 8.2837 cb25.fpc0023 856049 cb26714 G/A CACGTTTTTGGTAAAAATTTAGT GACAGCTGATTTGTTTTTCAGT 749 bp BstUI 184,77,127,361 184,77,488 chrV 8563213 17.7381 19.6775 cb25.fpc2220 889969 cb13582 T/G GTTTTCACTACCGAGCTCAC AAAAACGAGAATATTAACATGAAA 648 bp BstUI 22,626 22,455,171 chrV 8817071 17.7381 19.6775 cb25.fpc2220 636111 cb25866 T/C TATTCCATGTACAGGAGATTTTT CAATCTGCTCAACTGTAAGGTAT 748 bp BstUI 748 404,344 chrV 11040534 20.9763 22.2264 cb25.fpc4126 1587253 cb39276 G/C TTGCCTTTTTATAGTGAGATGTAA TACAGATGTGATTGCAAGAAAC 750 bp BstUI 514,236 443,71,236 chrX 1450009 0.6623 5.6449 cb25.fpc4033 1662544 cb21483 G/A TTATCACTGTCGAGAACACAAG ATTTGGAAGGGTAAGAGTTTTC 750 bp BstUI 280,470 750 chrX 4165195 9.5228 9.5228 cb25.fpc0045 1052543 cb20513 A/C ACAAAACTAAGATTATCGGAACA TAACTTTGGTTCAGAACACATTC 750 bp BstUI 258,492 258,240,252 chrX 4714213 9.5228 9.5228 cb25.fpc0045 1601561 cb42658 C/T TTTTGACTCTCATTTCTTTTACG TTGACTTTCACGTCATTTCATA 744 bp BstUI 317,166,261 317,427 chrX 7038517 12.1622 12.1622 cb25.fpc4066 367442 cb60266 A/G TTTATGGTTTCATTTAAAATCTCA AACTTTCAAACTTTTCCATAATACA 749 bp BstUI 749 381,368 chrX 15654348 20.7089 24.0659 cb25.fpc4023 455833 cb58122 T/G ATTATTTCTTTTCAATCCGTTTT TGAACGGTTTAGAACTAACTACG 751 bp BstUI 172,579 172,127,452 chrX 16679829 24.0659 24.0659 cb25.fpc4403 569549 cb27610 G/C GATTTGCAAACTATGGATTATGT GGAATTTGTAGACATTGTGATTT 752 bp BstUI 263,149,340 263,489 chrX 18163335 27.3783 34.1035 cb25.fpc0829 2036808 cb48171 G/A GCTCAAGAGGATTACTGTAAGAA CGAGTTGTACATAGCATACAGTTT 750 bp BstUI 182,164,404 182,568 chrX 18672788 27.3783 34.1035 cb25.fpc0829 1527355 cb48052 A/C GACACATCATCATCCTCTTCTAC ACGACGAAAACAGAATTATAAAC 732 bp BstUI 732 493,239 chrX 19400636 27.3783 34.1035 cb25.fpc0829 799507 cb15397 C/A ACTGTAGAAATGGTCCAAACTC ATAGATTGTGATGTCTGGGTGT 749 bp BstUI 254,495 749