chrom ultra_contig super_contig contig_pos strand indel_type qual_score methods pcr_primer_left pcr_primer_right af16_product hk104_product Cb1 cb25.fpc3441 c010801331.Contig1 67193 - I-10 68 cm,saha CTTCAACTCTGGTTTTCAATG AAACCACTAAATTAACGATTCTCT 253 bp 263 bp Cb1 cb25.fpc2032 c012100856.Contig2 288363 + D-7 37 cm,saha GTGTCATGTCATACTCTGAAACA ATGAATTCTCCATTCATCTATCA 246 bp 239 bp Cb1 cb25.fpc1402 c000201113.Contig1 926173 + D-7 48 cm,saha CACTTTTTGGCTCATTTTCTAT CCAAAATCTTCAAAAATCATCTA 249 bp 242 bp Cb2 cb25.fpc3052 c007300658.Contig3 254507 + D-8 68 cm,saha GTGTACAACGCTTAATGTCACT AAGATGTCGACAGTTATGATTTT 238 bp 230 bp Cb2 cb25.fpc1402 c002300642.Contig2 325014 - I-10 47 cm,saha GTGGTTTTTGAACCAATTTTT AGTCTTTTGGATAGGGTAAGC 763 bp 773 bp Cb2 cb25.fpc0305 c009001170.Contig3 323325 + D-18 52 cm,saha GAAATTTACGTGAAAATCTCAAA CGAAACTACTAACAAGTGTTCAAG 249 bp 231 bp Cb2 cb25.fpc3052 c013301077.Contig1 262173 + D-7 68 cm,saha AGAAAAATCCGACAGAATAAAAT TGTGTGTCATTTTTGATACTTTG 243 bp 236 bp Cb2 cb25.fpc0071 c009701346.Contig1 229481 + D-11 57 cm,saha AAGCTTCCATAGTCAAAAACAG CAATAATAGCCGAGAAAAATATG 973 bp 962 bp Cb3 cb25.fpc4010 c006600988.Contig2 45891 - I-8 68 cm,saha ACAATAAGCATCTTCTTCACAAT TCTAACTTTTTCAATCTCACATTC 251 bp 259 bp Cb3 cb25.fpc2234 c003000943.Contig3 78903 + D-11 54 cm,saha TGCATCACTCACTGTAAATAAGA TTTTTAATAAAGCAATTTTCCAC 249 bp 238 bp Cb3 cb25.fpc2976 c006201094.Contig1 82717 + D-7 62 cm,saha ATGTGGAATAGACGGATCTAACT TGCATTTTAAAAGGAAGATTGTA 246 bp 239 bp Cb3 cb25.fpc4030 c001001095.Contig1 29576 - I-8 59 cm,saha TTAGCCTCCTCAAAAACAAGT TAAAAATGATGGGTGGAAAAT 257 bp 265 bp Cb4 cb25.fpc3835 c000801056.Contig1 22663 + D-7 52 cm,saha GAATTCCAACTTTTAGAATCGTA AAAATCCAAAAGTCTCTCTCCT 241 bp 234 bp Cb4 cb25.fpc4069 c001800656.Contig3 382799 + D-11 62 cm,saha CTATGCTTCAGAAAGTCAAAGAT CCAACAATGGTATTATCAAAACT 249 bp 238 bp Cb4 cb25.fpc0110 c007900891.Contig1 16321 - I-7 68 cm,saha ACTATGTTCATCATCCGTCTCTA ATAGGTCTTCCTACGACAAAAAT 250 bp 257 bp Cb4 cb25.NA_087 c003901005.Contig1 39379 + D-7 50 cm,saha ACTGTATTTTTAGAAACCGTACAA ACATGTCAAAGTTACAGCAATTC 164 bp 157 bp Cb4 cb25.NA_087 c003901005.Contig1 39428 + D-7 44 cm,saha GCATCAAAATAAGAACCTCTCTA CCAAACTACAGTAATCCGAAAA 252 bp 245 bp Cb4 cb25.fpc0143 c005600388.Contig4 353351 + D-11 39 cm,saha AAAAGCAAGTTTGAAACCTAATA CATGATCGGAATAGTTATCCTAA 244 bp 233 bp Cb4 cb25.fpc4152 c005100830.Contig1 110878 + D-8 68 cm,saha GAATTCAAGGAAGTGTTGAAATA TTCCCTGTTTCAAATAGTTTATG 249 bp 241 bp Cb4 cb25.fpc4118 c004400792.Contig2 264598 - I-8 59 cm,saha GAAATATATTACCCTTTTCAGAACC CAAAATTAAAAGGAATGATTCAA 247 bp 255 bp Cb4 cb25.fpc0039 c007700706.Contig5 469937 + D-9 68 cm,saha ACCCTGAAGTTTTAAATTTTGTT TTTTTCTCTCCATCTCTTTTTCT 250 bp 241 bp Cb4 cb25.fpc4250 c004801558.Contig11 113591 + D-13 57 cm,saha TTCTTGGAAAGATAAAGAACTGA CATTAGACAGAAAGGATTACTGC 246 bp 233 bp Cb5 cb25.fpc0022 c003300912.Contig3 461678 + D-20 62 cm,saha AAAGTTTCAGTTTTTCTGGATTAC GTCAGAAAATCAGAGTGTGAACT 253 bp 233 bp Cb5 cb25.fpc0090 c011800736.Contig7 571563 + D-16 68 cm,saha TAAAATTGGAGGAAAGTTTCAAT TTATTTTCAGAGCCGATTTTTA 291 bp 275 bp Cb5 cb25.fpc4470 c000000931.Contig1 1124540 - I-10 68 cm,saha ATTGATAAATTGTTCGCCTTAC ACATTTTTCAAAATCCACTAGC 251 bp 261 bp CbX cb25.fpc4044 c008201137.Contig1 109600 - I-11 59 cm,saha CGAGATAGTGAGGAGTTCAATAA GACAAAAAGTCCCTAGGTTAGTC 244 bp 255 bp CbX cb25.fpc4066 c008000641.Contig3 315316 + D-8 68 cm,saha AGAAGCCATCAATAATCAAAAC ACGTCAATCAATACGAAAATTAG 250 bp 242 bp CbX cb25.fpc0829 c003800623.Contig2 807507 - I-7 68 cm,saha TGCAATGAGCTTTCAGATATAA GTTTTCTAGAACCACTCAAATCA 250 bp 257 bp CbX cb25.fpc0829 c012800671.Contig1 59855 + D-11 62 cm,saha AATACATCGAAAAATCGATAAAA GAATTTCCAGCAGAAATTAGTCT 251 bp 240 bp CbX cb25.fpc0045 c012500985.Contig1 421278 - I-9 62 cm,saha TAAGAAGCTGTTTTATGGGTCTA GGTAAGAATGAAATCCTTTCAAC 250 bp 259 bp CbX cb25.fpc0045 c012500985.Contig1 1066380 - I-11 62 cm,saha GACTCACATAGTTGAGGAGTGAC CATTTGAATTTTTGTTCATCTTC 250 bp 261 bp CbX cb25.fpc3857 c001001052.Contig1 1095098 + D-7 68 cm,saha CTGACATTTTCCTCAATTACAGT CGTTGTCGAAAAACTTACAGA 250 bp 243 bp CbX cb25.fpc0083 c004801857.Contig1 350191 + D-7 68 cm,saha TGAGCTCAATTATCTCGATTACTA AGATGCAGACCGAGAATAAATA 251 bp 244 bp CbX cb25.fpc4023 c003201106.Contig1 55688 + D-12 68 cm,saha TGGTTGAAAATGAAAATAGACTG GATTAAATAACGTTGACGAGAGA 253 bp 241 bp