These recent posters and presentations were given by some of our lab members.
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Identification of functional SNPs in noncoding regions of the human genome
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An oral presentation and poster given by D. Koboldt at HUGO's HGM2007 meeting,
on the identification of putative functional SNPs and assessing evidence of
purifying selection against various genome annotations, using the HapMap data set.
Daniel C. Koboldt and Raymond D. Miller.
Abstract
PowerPoint
PDF
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The identification of functional noncoding human SNPs
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A poster presented by R. Miller at CSHL's 2007 Biology of Genomes meeting, describing the identification and evaluation of putative
functional SNPs using genome annotation data and HapMap minor allele frequencies.
Daniel C. Koboldt and Raymond D. Miller.
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High-throughput identification of structural variations from sequence trace data
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A talk given by D. Koboldt at the first MC-GARD conference in Amsterdam, the Netherlands, describing a method to find putative deletions, insertions,
and copy number variants from individual sequencing reads.
Abstract
PowerPoint
PDF
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Book Review: Eugenics in the Deep South
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A review by D. Koboldt discussing Edward J. Larson's 1995 book,
Sex, Race, and Science: Eugenics in the Deep South. Johns Hopkins University Press.
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Genetic Map and Resources for C. briggsae
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A talk given by D. Koboldt at the
Caenorhabditis Evolution Worshop
in Oeiras, Portugal describing the integration of genetic and genomic resources for C. briggsae.
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Genomics of Complex Traits
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A journal club presentation by D. Koboldt discussing the article,
Genome-Wide Associations of Gene Expression Variation in Humans
published in PLoS Genetics by B. Stranger et al.
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SNP-marking the Human Genome
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Describing a version of the human genome in which SNP sites were marked with ambiguity codes - optimal for assay design.
Daniel C. Koboldt and Raymond D. Miller
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Building a LIMS for FP-TDI Genotyping
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A presentation of the high-throughput data pipeline that we built for SNP genotyping.
Daniel C. Koboldt, Pui-Yan Kwok, and Raymond D. Miller
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Exo-Free SNP Genotyping Assay Based On Fluorescence Polarization Detection
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Elimination of EXO in the FP-TDI assay further reduces the cost of this simple SNP genotyping method.
Shenghui Duan, Patricia Taillon-Miller, Raymond Miller, and Pui-Yan Kwok
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A Modular Approach to High-Throughput SNP Genotyping
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A flexible, modular approach to SNP genotyping yields low start-up instrumentation and assay development costs.
Shenghui Duan, Elizabeth Lovins, Rachel Donaldson, Ellen Vieux, Raymond Miller, Patricia Taillon-Miller, and Pui-Yan Kwok
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