Washington University School of Medicine SNP Research Facility
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SNP Research - Papers Since the Millennium

These twenty-first century papers list some of our lab members as major contributors.

2007
A second generation human haplotype map of over 3.1 million SNPs. A higher-density haplotype map of the human genome constructed in Phase II of the HapMap Project. International HapMap Consortium. Nature 2007 Oct; 449:851-861.
Genome-wide detection and characterization of positive selection in human populations. An analysis of Phase II HapMap data to detect regions of recent positive selection in the human genome. Pardis C. Sabeti and the International HapMap Consortium. Nature 2007 Oct; 449:913-918.
C. briggsae chromosomal organization The first publication describing our genetic map of C. briggsae and comparative genomics with C. elegans. LaDeana W. Hillier et al. PLoS Biology 2007 Jul 3;5(7):e167.
Immunogenetics of smallpox vaccination A report of association between innate immunity gene variants and acute vaccinia syndrome (AVS). Samuel L. Stanley Jr. et al. J. Infect. Dis.. 2007 Jul;196(2):212-219.
2006
Distribution of human SNPs and its effect on high-throughput genotyping An analysis of the distribution of human SNPs; SNPs in primer sites and their effect on HapMap genotyping. Koboldt DC, Miller RD, and Kwok PY. Hum Mutat. 2006 Mar;27(3):249-54.
2005
A haplotype map of the human genome A high-density haplotype map of the human genome constructed in Phase I of the HapMap Project. International HapMap Consortium. Nature 2005 Oct;437(7063):1299-320.
High-density single-nucleotide polymorphism maps of the human genome A SNP map of the human genome constructed from the characterization of over 50,000 SNPs in multiple populations. Miller RD et al. Genomics. 2005 Aug;86(2):117-26.
2004
Linkage Disequilibrium Maps Constructed with Common SNPs are Useful for First-pass Disease Association Screens A statistical analysis of our characterization and HapMap Project data yielded reduced-density LD maps, which offer an economical alternative for large-scale association studies . Taillon-Miller P, Kwok PY, et al. Genomics. 2004 Dec;84(6):899-912.
2003
Efficient high-throughput resequencing of genomic DNA A novel method of targeted resequencing that does not require PCR product purification. Miller RD, Duan S, Lovins EG, Kloss EF, Kwok PY. Genome Res. 2003 Apr;13(4):717-20.
2002
Primer design for PCR and sequencing in high-throughput analysis of SNPs Description of methods for designing resequencing primers for high-throughput SNP analysis. Vieux EF, Kwok PY, Miller RD. Biotechniques. 2002 Jun; Suppl:28-30, 32.
2001
Universal SNP genotyping assay with fluorescence polarization detection Description of a technique for high-throughput genotyping using template-directed dye induction. Hsu TM, Chen X, Duan S, Miller RD, Kwok PY. Biotechniques. 2001 Sep;31(3):560, 562, 564-8, passim.
Regions of low single-nucleotide polymorphism incidence in human and orangutan Xq SNP deserts and recent coalescences. Miller RD, Taillon-Miller P, Kwok PY. Genomics. 2001 Jan 1;71(1):78-88.
2000
Juxtaposed regions of extensive and minimal linkage disequilibrium in human Xq25 and Xq28 Taillon-Miller P, Kwok PY, et al. Nat Genet. 2000 Jul;25(3):324-8.
A high-density single-nucleotide polymorphism map of Xq25-q28 Taillon-Miller P and Kwok PY. Genomics. 2000 May 1;65(3):195-202.

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